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Simple script to reduce DNA sequences (in Fasta format) to K-mer frequencies.

To use FastaToKmerFreq, simply download the file FastaToKmerFreq.py from this repository and run it with Python3. The script requires numpy, which can be obtained via pip: FastaToKmerFreq takes as ...
GitHub

LncDC: a machine learning based tool for long non-coding RNA detection from RNA-Seq data.

Here, the mouse_test_toy.fasta file includes mouse RNA sequences in fasta format. The prediction results will be stored in the file lncdc_mouse.csv. -r is specified so the program will perform ...